Pinus pinaster drought response transcriptome (PpDR transcriptome)

The PpDR transcriptome joins information from previous Pinus pinaster transcriptome together with 454 sequencing of 12 libraries from different organs from plants subjected to well watered or water stress regime. Sequencing yielded a total of 2,416,362 reads, which were mapped against the ProCoGen reference transcriptome containing 191,544 transcripts. Unmapped reads were used for de novo assembly, allowing the identification of 8,700 newly assembled transcripts longer than 200bp, which were added to the reference transcriptome to obtain the “Pinus pinaster drought response transcriptome” (PpDR transcriptome).
Files; Sequences in fasta format, Transcripts information table, Transcriptome annotation and Blast2GO file.
Departamento de Ecología y Genética Forestal, Centro de Investigación Forestal (CIFOR), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Madrid, ES.