Data underlying the publication: "PanTools v3: functional annotation, classification, and phylogenomics "
收藏4TU.ResearchData2022-07-04 更新2026-04-23 收录
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https://data.4tu.nl/articles/_/19874485
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资源简介:
SnakeMake pipeline to reperform the pangenome construction and analyses on seven different datasets from the publication: "PanTools v3: functional annotation, classification, and phylogenomics". Pangenome analysis of <em>Drosophila</em>, <em>Arabidopsis thaliana</em>, <em>Saccharomyces cerevisiae, Pectobacterium </em>and SARS-CoV-2. Demonstration of PanTools' scalability on <em>Homo sapiens</em> and <em>Solanum lycopersicum</em>. <br>
本数据集依托Snakemake分析流水线,可复现发表于《PanTools v3:功能注释、分类与系统发育组学》中的7套数据集的泛基因组(pangenome)构建与分析流程。本次分析覆盖果蝇(Drosophila)、拟南芥(Arabidopsis thaliana)、酿酒酵母(Saccharomyces cerevisiae)、果胶杆菌属(Pectobacterium)以及SARS-CoV-2的泛基因组研究,并验证了PanTools在人类(Homo sapiens)与番茄(Solanum lycopersicum)中的可扩展性。
创建时间:
2022-07-04



