Summary of regression analysis for all genes onto sCNV markers.

Shown are the results of the regression analyses for each gene onto selected sCNV markers as decribed in Methods. A. Distribution of variance explained by sCNV across all genes. Counts for number of genes with various cut-offs for variance explained(“R2>cutoff” column 1) for all genes and all sCNV markers (“trans+cis”, column 2) and for cis markers only (“cis”, column 3) using the real data was compared to a similar analysis where the connection between the expression and sCNV markers was permuted (“pm_trans+cis” and “pm_cis”, columns 4 and 5).