Protein Structure Datasets for Protein Workshop
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https://zenodo.org/record/8282469
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资源简介:
Raw + Processed Datasets used in the ProteinWorkshop Representation Learning Benchmark
Includes datasets from:
* The Antibody Developability dataset from Chen et al. (https://doi.org/10.1101/2020.06.18.159798)
* CATH from Ingraham et al. (https://www.mit.edu/~vgarg/GenerativeModelsForProteinDesign.pdf)
* CCPDB datasets from Agrawal et al. (https://doi.org/10.1093/database/bay142)
* The Deep Sea Proteins dataset from Sieg et al. (https://doi.org/10.1002/prot.26337)
* Reaction Class prediction from Hermosilla et al. (https://doi.org/10.48550/arXiv.2007.06252)
* FoldClassification from Hou et al. (https://doi.org/10.1093/bioinformatics/btx780)
* MaSIF Site dataset from Gainza et al. (https://doi.org/10.1038/s41592-019-0666-6)
* Metal3d Dataset from Duerr et al. (https://doi.org/10.1038/s41467-023-37870-6)
* Post-translational Modification Dataset from Yan et al. (https://doi.org/10.1016/j.crmeth.2023.100430)
创建时间:
2023-08-28



