Input and Output Files for DEG analysis using edgeR
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资源简介：
Input count data (*_input.txt files, calculated by kallisto software) and output DEG analysis data (*_output.txt files, calculated by edgeR tool). 5M, 20M, or 30M indicates the number of subsampled reads used in the analysis.
1. Files with NO80_p[1-7]_[5|20|30]M_[input/output].txt or NO80_s[1-6]_[5|20|30]M_[input/output].txt
These files were for the calculation of Fig. 2b, where
NO80_p1_* NO80 vs RIN1.0, 2.2
NO80_p2_* NO80 vs RIN2.2, 3.8
NO80_p3_* NO80 vs RIN3.8, 5.3
NO80_p4_* NO80 vs RIN5.3, 6.3
NO80_p5_* NO80 vs RIN6.3, 7.1
NO80_p6_* NO80 vs RIN7.1, 8.0
NO80_p7_* NO80 vs RIN8.0, 9.0
NO80_s1_* NO80 vs RIN1.0, 2.2, 3.8
NO80_s2_* NO80 vs RIN2.2, 3.8, 5.3
NO80_s3_* NO80 vs RIN3.8, 5.3, 6.3
NO80_s4_* NO80 vs RIN5.3, 6.3, 7.1
NO80_s5_* NO80 vs RIN6.3, 7.1, 8.0
NO80_s6_* NO80 vs RIN7.1, 8.0, 9.0
2. Other files were used for the calculation of Table 3, where
AE: Directly submerged in Ethanol
AR: Directly submerged in RNAlater
CE: Crushed and submerged in Ethanol
CR: Crushed and submerged in RNAlater
CT: Crushed and submerged in TRIzol
NO: Flash-frozen in liquid nitrogen
创建时间：
2015-11-09
