Metatranscriptomic sequencing of single mosquitos in California

Data associated to a study of the microbiota of 148 single mosquitos gathered in California. This includes supporting data for manuscript figures and processed data files necessary for reproducing the analysis. Manifest: Supporting data for manuscript figures are named DataS* or TableS*. Additional files include: * Assembled contig files (contigs.zip)* CD-HIT-EST clusters of contigs > 500 base pairs long. (500_contigs_cluster.clstr)* Read counts per contig (contig_stats_all.tsv)* Least Common Ancestor (LCA) assignments for each contig from blast against nt/nr (contig_stats_lca.tsv)* Final taxonomic calls for each contig, after decontamination (contig_calls_decontam.tsv)* Mosquito genomes used for host subtraction (mosquito_genomes_ref.txt) * Viral segments found, grouped by genome, including sample and contig information. (virus.json)