Dataset of Proteins Involved in Lidane Degradation Pathways

Dataset of Proteins Involved in Lindane Degradation Pathways General Information This repository contains a curated collection of protein sequences involved in lindane degradation pathways. The dataset was compiled from publicly available resources and scientific literature to support the identification, annotation, and analysis of proteins associated with microbial lindane biodegradation. Datasets Included 1. Lindane Biodegradation-Associated Proteins Description: Proteins associated with the biodegradation of lindane (γ-hexachlorocyclohexane). Sources and Licensing UniProt – CC BY 4.0 Files Lindane_degradation_annotation_v1.0.xlsx Tabular annotation file listing all proteins included in the dataset, together with source-derived metadata and curated descriptive information. Lindane_degradation_seqs_v1.0.fasta Reference FASTA file containing the amino acid sequences of proteins associated with lindane biodegradation pathways. Usage and Attribution This dataset is freely available under the licensing conditions of the original data sources. Users should acknowledge both the BIOSYSMO project and the original databases and publications used during dataset curation. If you use this dataset, please cite: Source Reference Access Type UniProt The UniProt Consortium (2024). UniProt: the Universal Protein Knowledgebase. Nucleic Acids Research, 52(D1), D1–D10. DOI: 10.1093/nar/gky1049 Open access (CC BY 4.0) Paper 1 Sahoo, B. & Chaudhuri, S. (2023). Removal of lindane in liquid culture using soil bacteria and toxicity assessment in human skin fibroblast and HCT116 cell lines. Environmental Technology, 44(9), 1213–1227. Subscription Paper 2 Chuang, S., Wang, B., Chen, K., Jia, W., Qiao, W., Ling, W., Tang, X., & Jiang, J. (2020). Microbial catabolism of lindane in distinct layers of acidic paddy soils combinedly affected by different water managements and bioremediation strategies. Science of the Total Environment, 746, 140992. Subscription Paper 3 Zhang, W., Lin, Z., Pang, S., Bhatt, P., & Chen, S. (2020). Insights Into the Biodegradation of Lindane (γ-Hexachlorocyclohexane) Using a Microbial System. Frontiers in Microbiology, 11, 522. Open Access Project Acknowledgement BIOSYSMOdb and its derived datasets were developed and compiled within the BIOSYSMO project, funded by the European Union’s Horizon Europe Research and Innovation Programme under Grant Agreement No. 101060211. Acknowledgements UniProt and the scientific publications listed above for providing the data and knowledge that supported dataset curation. The BIOSYSMO Consortium for their contributions to the design, development, validation, and maintenance of BIOSYSMOdb. We gratefully acknowledge the support of the European Union and the Horizon Europe Programme in advancing research on bioremediation and contaminant biodegradation. Contact Information For questions regarding the dataset, please contact: Project Coordinator: Dr. Sara Gil Guerrero; Dr. Lila Otero González Lead Researcher: Marta Franco de Benito, MSc ; Dr. Akanksha Mishra IDENER Research & Development 📧 [e-mail] ; [e-mail]📧 [e-mail]; [e-mail] Version Information Current Version: 1.0 Release Type: Initial public release Previous Versions: None Last Updated: 15 May 2026