Zemax (optical design) files of microscope objectives, tube lenses, and Fourier imaging setups

This fileset contains Zemax files related to the manuscript entitled “Comparative analysis of imaging configurations and objectives for Fourier microscopy” by Jonathan A. Kurvits, Mingming Jiang, and Rashid Zia. Specifically, it includes multi-configuration Zemax files that allow for the comparison of different Fourier microscopy imaging configurations as well as Zemax lens files and lens catalogs for microscope objectives and tube lenses, as inferred from the following published patents: 1) U.S. Patent # 5,517,360; assignee: Olympus; objective description: 60x, 1.4 NA Plan Apo. 2) U.S. Patent # 5,659,425; assignee: Olympus; objective description: 100x, 1.65 NA Apo. 3) U.S. Patent # 6,504,563; assignee: Zeiss; objective description: 100x, 1.45 NA TIRF. 4) U.S. Patent # 6,519,092; assignee: Nikon; objective description: 60x, 1.4 NA Plan Apo. 5) U.S. Patent # 6,519,092; assignee: Nikon; objective description: 100x, 1.4 NA Plan Apo. 6) U.S. Patent # 7,046,451; assignee: Nikon; objective description: 60x, 1.5 NA TIRF (modeled as 1.49 NA to match possible commercial realization). 7) U.S. Patent # 7,046,451; assignee: Nikon; objective description: 100x, 1.5 NA TIRF (modeled as 1.49 NA to match possible commercial realization). 8) U.S. Patent # 7,889,433; assignee: Nikon; objective description: 60x, 1.25 water immersion. <strong>Update</strong> <strong>(9/14/2015, Version 2, filenames annotated with "_v2" suffix):</strong> For all objectives files and the objective catalog, the immersion oil layer semi-diameter has been changed to float so as to prevent unrealistic vignetting that may otherwise occur. Additionally, for all multiconfiguration files, the "before image plane" configuration has been modified. Specifically, the position of the Bertrand Lens has been modified so that it correctly images the BFP image onto the real image plane. In all cases, this required a shift in the position of the Bertrand Lens of ~1cm further from the tube lens. <strong>Update (10/19/2015, Description only):</strong> The related paper on “Comparative analysis of imaging configurations and objectives for Fourier microscopy” by Jonathan A. Kurvits, Mingming Jiang, and Rashid Zia has been published in the Journal of the Optical Society of America A [J. Opt. Soc. Am. A 32, 2082-2092 (2015)]. This paper provides a detailed description of how these Zemax models were produced and analyzed. If you use the Zemax models provided here, we would appreciate it if you could cite this paper as well as the figshare fileset. Here is a link to the paper: http://dx.doi.org/10.1364/JOSAA.32.002082

本文件集包含与Jonathan A. Kurvits、Mingming Jiang及Rashid Zia所著题为《傅里叶显微镜成像配置与物镜对比分析》的手稿相关的Zemax文件。具体而言，其包含可用于对比不同傅里叶显微镜成像配置的多配置Zemax文件，以及从下述已发表专利中推导得到的显微镜物镜和镜筒透镜的Zemax透镜文件与透镜目录：
1. 美国专利第5,517,360号，受让人（assignee）为奥林巴斯（Olympus），物镜规格为60倍、数值孔径（Numerical Aperture，NA）1.4的平场复消色差（Plan Apo）物镜；
2. 美国专利第5,659,425号，受让人（assignee）为奥林巴斯（Olympus），物镜规格为100倍、数值孔径1.65的复消色差（Apo）物镜；
3. 美国专利第6,504,563号，受让人（assignee）为蔡司（Zeiss），物镜规格为100倍、数值孔径1.45的全内反射荧光（Total Internal Reflection Fluorescence，TIRF）物镜；
4. 美国专利第6,519,092号，受让人（assignee）为尼康（Nikon），物镜规格为60倍、数值孔径1.4的平场复消色差物镜；
5. 美国专利第6,519,092号，受让人（assignee）为尼康（Nikon），物镜规格为100倍、数值孔径1.4的平场复消色差物镜；
6. 美国专利第7,046,451号，受让人（assignee）为尼康（Nikon），物镜规格为60倍、数值孔径1.5的全内反射荧光物镜（为匹配实际商用产品，建模时将数值孔径调整为1.49）；
7. 美国专利第7,046,451号，受让人（assignee）为尼康（Nikon），物镜规格为100倍、数值孔径1.5的全内反射荧光物镜（为匹配实际商用产品，建模时将数值孔径调整为1.49）；
8. 美国专利第7,889,433号，受让人（assignee）为尼康（Nikon），物镜规格为60倍、数值孔径1.25的水浸物镜。

<strong>更新</strong>（2015年9月14日，版本2，文件名后缀标注“_v2”）：针对所有物镜文件及物镜目录，已将浸油层半直径调整为浮点型参数，以避免可能出现的非实际渐晕现象。此外，所有多配置文件的“像面前置”配置已完成修改：具体为伯特兰透镜（Bertrand Lens）的位置已调整，使其可将背焦面（BFP）成像正确投射至实际像面。所有案例中，均需将伯特兰透镜向远离镜筒透镜的方向移动约1厘米。

<strong>更新（2015年10月19日，仅更新说明文本）</strong>：上述《傅里叶显微镜成像配置与物镜对比分析》的相关论文已发表于《美国光学学会会志A辑》[J. Opt. Soc. Am. A 32, 2082-2092 (2015)]。该论文详细阐述了本文件集提供的Zemax模型的构建与分析流程。若您使用此处提供的Zemax模型，我们恳请您同时引用该论文与本figshare文件集。论文链接：http://dx.doi.org/10.1364/JOSAA.32.002082

搜集汇总

背景与挑战

背景概述

该数据集包含用于傅里叶显微镜研究的Zemax光学设计文件，涵盖多种显微镜物镜和管透镜的设计，基于多项专利数据。这些文件支持对不同的成像配置进行比较分析，并关联到一篇已发表的学术论文。