Alternative Polyadenylation (APA) events altered in the ΔCFIm knockout mutant compared to controls.

A total of 1,447 total genes contain multiple poly(A) sites within 3′ UTR regions in wild-type control and/or ΔCFIm mutant data from this study. In all 4 datasets, 940/1,447 genes display APA. Out of 1,447 instances, 123 are recorded where a single poly(A) peak in control expands to multiple APA events in mutant (dark green highlight). Out of 1,447 instances, 193 are reported of a single poly(A) peak in mutant expanding to multiple APA events in wild-type controls (light green highlight). Out of 1,447 APA events, 155 occur where the location of the predominant poly(A) peak was significantly changed in the mutant background (orange highlight). Annotated MACS2 poly(A) peak results are shown for the APA genes from each dataset as individual tabs. (XLSX)