ChIP-seq results and analysis pipeline for CaRtg1 in C. albicans -- a study on retrograde pathway in mitochondrial dysfunctions

Results and data analysis pipeline for ChIP-seq experiments involving CaRtg1 protein in Candida albicans, intended to elucidate the function of the retrograde pathway in mitochondrial dysfunctions. Experiments were conducted on three strains:WT C. albicans (BWP17)ΔCaaep3ΔCappr13All experiments were conducted in three biological replicates.Files included:analysis_pipeline.zip -- scripts along with reference and annotation files used in the analysis,results.zip -- result files, including MACS2 and ChIPseeker outputs, batch correction results, and inputs used in data enrichment analysis.Each archive contains a README.txt with detailed descriptions of included files.