five

Expression data for filamentous-form yeast with genetic perturbations

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https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE5938
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We construced combinations of genetic deletions to infer genetic interactions in genomic expression data. Keywords: combinatorial genetic perturbations The yeast transciptome was measured in rich media for a wild-type strain as a reference. We then collected genomic expression data in filamentous-growth conditions for 16 strains: wild-type, TEC1 gene deletion, CUP9 gene deletion, SFL1 gene deletion, SOK2 gene deletion, SKN7 gene deletion, and all possible pairwise combinations of deletions.
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2016-07-01
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