Dynamical Properties of PPI Networks (DyPPIN)
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https://zenodo.org/record/14535417
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资源简介：
The dataset collection was introduced in:The collection contains datasets that describe dynamical properties (DP) computed for pairs of proteins in Protein-Protein Interaction Networks (PPIN). DP values are derived from DP computed for Biochemical Pathways (BPs). Currently we provide values for the sensitivity property.
The repository is organized as follows:
DyBP (Dynamics of Biochemical Pathways) contains the properties computed via simulations of computational models in BioModels.
{property}.csv files storing the values for biochemical species pairs (DyBP) / protein pairs (DyPPIN) for each DP. Each .csv file has 4 columns:
'BiomodelID': the BP identifier
'Input': the input species name.
'Output': the output species name.
'{Property}': the value for the DP holding for the input/output pair.
DyPPIN (Dynamics of Protein-Protein Interaction Networks) contains the DPs computed for protein pairs in the BioGRID PPIN.
{property}.csv files storing the values for biochemical species pairs (DyBP) / protein pairs (DyPPIN) for each DP. Each .csv file has 4 columns:
'BiomodelID': the BP identifier
'Input': the input protein UniProt identifier.
'Output': the output protein UniProt identifier.
'{Property}': the value for the DP holding for the input/output pair.
graphs directory contains the graph representations protein subgraphs. We provide the graph in .dot format.
创建时间：
2025-01-15
