Total Number of Differentially Expressed Genes in the Seed Coats of the Clark and Harosoy Isoline Pairs at Different Seed Weight Stages.

The number of differentially expressed genes in Clark or Harosoy standard versus the defective seed coat isoline that meet the criteria of ≥2 fold differential expression, ≥5 RPKM and p-value ≤0.05 by DESeq analysis. Both: the number of differentially expressed genes shared in common between both the Clark and Harosoy isoline pairs and also the expression levels of these genes are in the same direction i.e. if expression of a particular gene was higher in Clark wild-type and lower in the defective isoline, it was also higher in Harosoy wild type isoline and lower in Harosoy defective isoline. Opposite: If a particular gene showed higher expression in the standard isoline of Clark compared to the Clark defective, but it showed higher expression in the defective Harosoy compared to the standard Harosoy line.