An automatic fascicle tracking algorithm quantifying gastrocnemius architecture during maximal effort contractions

This repository includes all the experimental data, tracking code, and tracked trials reported in Drazan JF, Hullfish TJ, Baxter JR. 2019. An automatic fascicle tracking algorithm quantifying gastrocnemius architecture during maximal effort contractions. <em>PeerJ</em> 7:e7120. DOI: 10.7717/peerj.7120. Updated tracking code will be maintained on github https://github.com/joshrbaxter/ultrasound_tracking To get started - download the 'matlab' and 'Sample Videos' folders and unzip them into a common directory. If you are having path issues (will first appear when trying to pull the Data structure), then these folders are either in the wrong path or the path separators are incorrect (this was developed on Windows and linux/OSX use a different path format).