Additional file 10 of C11orf95-RELA fusion drives aberrant gene expression through the unique epigenetic regulation for ependymoma formation

Additional file10: Table S2. (A) List of RELAFUS1-HA peaks in TSS±10kb in H1203-mEPN cells (649 peaks; 520 genes). (B) List of H3K27ac peaks in H41-mEPN cells. (C) List of H3K27ac peaks in H1203-mEPN cells. (D and E) List of super-enhancers (SEs) identified in H3K27ac peaks in mEPN cells (D, H41 and E, H1203 cells). (F) List of overlapping of super-enhancers (SEs) in H41 and H1203-mEPN cells. (G) List of overlapping genes between the single-cell transcriptomic signature genes of ST-ependymomas and the RELAFUS1 target genes in 293T-RELAFUS1 or mouse ependymoma (H1203) cells. (XLSX 5761 KB)