Metagenome and draft genomes of Pseudoblepharisma tenue and its two photosynthetic endosymbionts

This repository stores all supporting material for the project that aimed to study Pseudoblepharisma tenue and its two different photosynthetic endosymbionts.Pseudoblepharisma_tenue_metagenome_P2P4P5.fna: Metagenome of Pseudoblepharisma tenue and its two photosynthetic endosymbionts: "Ca. Thiodictyon intracellulare" and Chlorella sp. The metagenome was co-assembled from three different libraries (P2, P4 and P5) using SPAdes. Scaffolds are larger than 1,000 bp. Please refer to the manuscript for further details.Pseudoblepharisma_tenue.fna: Draft genome of the ciliate host in the Pseudoblepharisma tenue symbiotic consortium. The draft genome was manually binned and curated from the metagenome of Pseudoblepharisma tenue using Anvi'o.Chlorella_sp.fna: Draft genome of the green endosymbiont of Pseudoblepharisma tenue: Chlorella sp. The draft genome was manually binned and curated from the metagenome of Pseudoblepharisma tenue using Anvi'o.Ca_Thiodictyon_intracellulare.fna: Draft genome of the purple endosymbiont of Pseudoblepharisma tenue: "Ca. Thiodictyon intracellulare". The draft genome was manually binned and curated from the metagenome of Pseudoblepharisma tenue using Anvi'o.Ca_Thiodictyon_intracellulare.faa: Proteome predicted from the draft genome of the purple endosymbiont of Pseudoblepharisma tenue: "Ca. Thiodictyon intracellulare". The proteome was predicted with Prodigal.Pseudoblepharisma_tenue_mtDNA.fna: Draft mitochondrial genome of the ciliate host in the Pseudoblepharisma tenue symbiotic consortium. The scaffolds were produced by a series of iterations with NOVOPlasty using different seeds. The final set of scaffolds are ordered according to their overlapping ends.Pseudoblepharisma_tenue_mtDNA.gbk: Annotation for Pseudoblepharisma_tenue_mtDNA.fna. Please refer to the manuscript for further details.