Additional file 1: Table S1. Re-annotated results by using TEsorter. (Figure 1 box V TE entries). Table S2. Re-annotated results by using DeepTE. (Figure 1 box VI TE entries). Table S3. Figure 1 box I
Eighteen samples were processed in 2–4 replicates after DNA extraction. A single SNP locus can differ by 0, 1 or 2 between two replicates (i.e., replicates can match at both, one or neither allele). T
Data folder for manuscript:"HORmon: automated annotation of human centromeres"Olga Kunyavskaya, Tatiana Dvorkina, Andrey V. Bzikadze, Ivan Alexandrov, Pavel A. Pevzner
Synthetic datasets were generated with 10,000 simulated sequencing reads to mimic the repeat architecture of the HTT gene. Each read was constructed to represent HTT exon 1, including variable-length
