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资源简介：
RNA immunoprecipitation sequencing (RIP-seq)
应用场景：
创建时间：
2023-03-13
相关数据集
Sequencing data of Photoactivatable Ribonucleoside-Enhanced Crosslinking and Immunoprecipitation (PAR-CLIP) of QKI-5 and QKI-6
This study was designed to look for the RNAs that directly bind with QKI HA tagged QKI-5 and QKI-6 were overexpressed in QPP GSCs and were applied to PAR-CLIP protocol. RNAs were exacted and sent for
NIAID Data Ecosystem40
Advancing Functional Utility of PAR-CLIP by Quantifying Background Binding to mRNAs and lncRNAs. Homo sapiens
We developed a method for measuring non-specific background in PAR-CLIP data demonstrating that covalently crosslinked background binding is common, reproducible and apparently universal. Furthermore,
NIAID Data Ecosystem40
Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence
Puf4 T650C/C724R Mutant bound to Cox17 RNA 3' UTR recognition sequence Descriptor: COX17 RNA target sequence, Protein PUF4, SULFATE ION Authors: Miller, M.T, Higgin, J.J, Hall, T.M.T. Deposit date: 20
Protein Data Bank Japan2024-02-21 更新50
Footprinting SHAPE-eCLIP reveals transcriptome-wide hydrogen bonds at RNA-protein interfaces. Corley et al.
EMSAs testing binding of candidate iron response elements by iron response proteins, and RT-qPCR measuring transcript level response of these candidates to various cellular iron conditions.
NIAID Data Ecosystem40
