Identification of Bmal1 binding sites by ChIP-seq in mouse lung tissue

ChEBI2019-10-17 更新2026-07-12 收录

昼夜节律转录调控

ChIP-seq基因组学分析

数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-MTAB-6354 数据链接链接失效反馈

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资源简介：

Identification of Bmal1 binding sites by ChIP-seq in mouse lung tissue

创建时间：

2019-10-17

Non-Circadian Expression Masking Clock-Driven Weak Transcription Rhythms in U2OS Cells

昼夜节律转录调控

U2OS细胞系

U2OS cells harbor a circadian clock but express only a few rhythmic genes in constant conditions. We identified 3040 binding sites of the circadian regulators BMAL1, CLOCK and CRY1 in the U2OS genome.

NIAID Data Ecosystem70

Nascent-Seq Reveals Novel Features of Mouse Circadian Transcriptional Regulation [StrandSpe_NascentSeq]

昼夜节律转录调控

分子机制

Over the past decade, genome-wide assays have underscored the broad sweep of circadian gene expression. A substantial fraction of the transcriptome undergoes oscillations in many organisms and tissues

NIAID Data Ecosystem30

Characterisation of the temporal hepatic transcriptome at subcellular level

昼夜节律转录调控

RNA亚细胞定位与动态

In eukaryotes, RNA is synthesized in the nucleus, spliced, and exported to the cytoplasm where it is translated and finally degraded. Any of these steps could be subject to temporal regulation during

NIAID Data Ecosystem30

Heart-enriched rhythmic proteins with human-mouse conserved E-box motifs.

昼夜节律转录调控

心脏蛋白质组学

Promoter sequences (retrieved from UCSC [30]), along with PEDB [32] and EMBOSS [33] were used to investigate CLOCK and BMAL1 transcriptional elements in the genes of interest. V# = Transcript variant

NIAID Data Ecosystem50

Modeling an Evolutionary Conserved Circadian Cis -Element

昼夜节律转录调控

顺式调控元件预测

Circadian oscillator networks rely on a transcriptional activator called CLOCK/CYCLE (CLK/CYC) in insects and CLOCK/BMAL1 or NPAS2/BMAL1 in mammals. Identifying the targets of this heterodimeric basic

NIAID Data Ecosystem30

Identification of Bmal1 binding sites by ChIP-seq in mouse lung tissue

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