One thousand phylogenetic trees of all euphyllophyte plants for evolutionary analyses

## Dataset and code used to generate the article "One thousand phylogenetic trees of all euphyllophyte plants for evolutionary analyses"## Ignacio Ramos-Gutiérrez - "phylogenies_MAKEFILE.Rmd": step-by-step code of data management and tree compilation- "best_wcvp.tre_dated": tree as published in Carruthers et al. (2026)- "best_wcvp_corrected.tre": modified tree after name matching (see makefile)- "synonym_list.csv": tip names in the corrected tree and accepted name in WCVP v15- "taxonomy_tree.csv": tip names and associated taxonomic ranks (order, family, genus)- "wcvp_checklist.csv": accepted species en WCVP v15 and associated taxonomic ranks (order, family, genus)- "wcvp_v15/" folder: names and distributions of WCVP v15. See https://sftp.kew.org/pub/data-repositories/WCVP/.- "files/" folder: intermediate and final data generated- "files/order_trees" folder: intermediate data generated (order-by-order preparation and compilation).- "files/randtip_phylogenies/crownprob": final trees resulting of merging all order tree. crownprob stands for the imputation method, in which the crown node was used as deepest insertion point, and probability was proportional to branch length.- "analyses/" folder: files used for he Technical validation- "analyses/trees": randtip and PhyloMaker trees used to compare metrics, as well as the original Arecales backbone used as reference, and the 66% pruned tree used as toy backbone.- "analyses/WGRSPD_l3": geographic data of botanical countries associated to WCVP distributions.- "analyses/phylomeasures_comparison.R": code used for the technical validation