Changes in transcript levels for nucleus-encoded mitochondrial protein genes that were altered in expression by AA, MFA, or both treatments.

Genes listed either show significant change for one or both treatments or, for some of the genes discussed in the text, are listed regardless of significance. Genes that encode proteins for which there is proteomic data indicating mitochondrial localization or association but not previously annotated as such based on prediction algorithms are indicated by an asterisk [43] and/or a carrot (J.-P.Yu, unpublished). Otherwise, genes were determined to encode mitochondrial proteins based on annotations for the arrays (see ‘Materials and Methods’) or The Arabidopsis Information Resource database. Number symbols indicate the nine genes that were significantly induced by both inhibitor treatments. Fold-change (FC) is the ratio between transcript levels in inhibitor treated plants compared to control treated plants. Ala, alanine; cyt, cytochrome; DH, dehydrogenase; mito., mitochondrial; prot., protein; put., putative; sub., subunit; UQ, ubiquinone.