Chromosome-scale whole genome assembly and annotation of the Jamaican field cricket Gryllus assimilis
收藏Figshare2024-09-01 更新2026-04-28 收录
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https://figshare.com/articles/dataset/_b_Chromosome-scale_whole_genome_sequences_and_annotation_of_the_Jamaican_field_cricket_b_b_i_Gryllus_assimilis_i_b_/26761927
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Gryllus assimilis, commonly known as Jamaican field cricket, is an edible insect with significant economic value in sustainable food production. Despite its importance, a high-quality reference genome of G. assimilis has not yet been published. Here, we report a chromosome-level reference genome of G. assimilis based on Oxford Nanopore Technologies (ONT) sequencing, Illumina sequencing, and Hi-C technologies. The assembled genome has a total length of 1.60 Gbp with scaffold N50 of 102 Mbp, and 96.80% of the nucleotides was assigned to 15 chromosome-scale scaffolds. The assembly completeness was validated using BUSCO, achieving 99.5% completeness against the arthropoda database. We predicted 27,645 protein-coding genes, and 825 Mb repetitive elements were annotated in the reference genome. This reference genome of G. assimilis can provide a basis for the subsequent development of genomic resources, offering insights for future functional genomic studies, comparative genomics, and DNA-informed breeding of this species.
创建时间:
2024-09-01



