Genes with the largest fold change in expression identified in the list of those differentially expressed.

The values in the Table refer to log2 based fold changes. For any differentially expressed gene, if its log2fold change value is infinity (or minus infinity) in any model, it was assigned a value of 10 (or −10). The significantly differentially over-expressed in DCIS in comparison to non-tumorigenic MCF10A include anterior gradient homolog 2 (AGR2), grainyhead like (Drosophila) (GRHL2), apolipoprotein D (APOD), chemokine (C-C motif) ligand 20 (CCL20), cation transport regulator homolog 1 (E. coli) (CHAC1), claudin 4 (CLDN4), lipocalin 2 (LCN2), lipase member H (LIPH), fucosyltransferase 3 (FUT3), and cAMP responsive element binding protein 5 (CREB5). The genes which were found be significantly down-regulated include alcohol dehydrogenase 1B (class I), (ADH1B), RNA, Ro-associated Y5 (RNY5), transforming growth factor, beta-induced (TGFBI), podoplanin (PDPN), tolloid-like 1 (TLL1), dermatopontin (DPT), cell adhesion molecule 3 (CADM3), aspartoacylase (ASPA), Duffy blood group, chemokine receptor (DARC) and nidogen 1 (NID1).