Benchmarking of long-read correction methods

Genomic data of E. coli strain K12 substrain DH5alpha were generated using Illumina and Oxford Nanopore technologies in order to assess error rates.

NIAID Data Ecosystem30

Data for "A replicable and modular benchmark for long-read transcript quantification methods"

This dataset was used in the paper titled "A replicable and modular benchmark for long-read transcript quantification methods". It contains simulated ONT and PacBio datasets as follows: Mouse PacBi

Zenodo2025-07-11 更新00

Data for "A replicable and modular benchmark for long-read transcript quantification methods"

This archive contains the input necessary to run the inital (TranSigner-protocol and IsoQuant-protocol) benchmarks associated with the lr_quant_benchmarks repository. The archive can be decompressed

Zenodo2024-07-31 更新00