Quantitative proteome data for all identified proteins in patients without (Non–AAA) and with abdominal aortic aneurysm (AAA) Proteins quantified using TMT isobaric mass tags.

Protein extracts from arteries from 33 Non-AAA controls and 11 AAA case individuals were processed as described in the methods sections, randomly labeled with six-plex TMT isobaric tags (mass tags 127–130) and analyzed by nano-LC MS/MS. The individual samples were compared with a pool of all 44 samples (TMT tag 126). The resulting ratios for each protein were used for student’s t-test calculation. Columns indicate Uniprot accession number, Protein function, Clinical parameters, the percentage of matching amino acids from identified peptides, the sum of unique peptides used for identification, the theoretical protein molecular weight and the calculated isoelectric point. Blanks indicate that the specific protein was not identified in this particular experiment. Samples from from patients with AAA are indicated with AAA in row 2, whereas patients without AAA are indicated with C.
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