VFDB

A VFDB report provides information of the virulence factors in each sample.Template: Hit of virulence genes in VFDBFunction: Predicted function of the templateGenome: Strain names where the template is foundScore, Expected, Template_length, Template_Identity, Template_Coverage, Query_Identity, Query_Coverage, Depth, q_value, p_value: Parameters output by VFDB that report how well the match is.shotgunReadcount: Number of reads for each sample after decontamination of human readsRelavantPercentInVF: The number of reads matched to the virulence gene / Total reads matched to virulence genes in the samplePercentageInShotgun: The number of reads matched to the virulence gene / Total reads in the sampleSampleID: Sample ID for each shotgun sequencing