Pseudomonas fluorescens strain:MS82 Genome sequencing and assembly. Pseudomonas fluorescens strain:MS82
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The genomic sequence of Pseudomonas fluorescens strain MS82, a biocontrol bacterium isolated from a rhizosphere of a soybean plant, is reported and analyzed in relation to its extensive antifungal activity. Plate assay results showed that MS82 was distinctly inhibiting the mushroom fungal pathogens, Mycogone perniciosa and Trichoderma viride, but not effecting the A. bisporus and P. ostreatus. The strain MS82 genome consists of a circular chromosome of 6,207,556 bp that encodes 5401 protein coding genes and 131 RNA genes. Genome analysis revealed gene clusters for synthesis of antifungal compounds, such as phenazine, pyocyanin, pyoverdine, volatile HCN and antibiotics peptides. Further genome analysis will help in promoting insights into biocontrol in mushroom cultivation.
