R scripts

R scripts in this fileset are those used in the PLOS ONE publication "A snapshot of translational research funded by the National Institutes of Health (NIH): A case study using behavioral and social science research awards and Clinical and Translational Science Awards funded publications." The article can be accessed here: http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0196545This consists of all R scripts used for data cleaning, data manipulation, and statistical analysis used in the publication.There are eleven files in total:1. "Step1a.bBSSR.format.grants.and.publications.data.R" combines all bBSSR 2008-2014 grant award data and associated publications downloaded from NIH Reporter. 2. "Step1b.BSSR.format.grants.and.publications.data.R" combines all BSSR-only 2008-2014 grant award data and associated publications downloaded from NIH Reporter. 3. "Step2a.bBSSR.get.pubdates.transl.and.all.grants.R" queries PubMed and downloads associated bBSSR publication data.4. "Step2b.BSSR.get.pubdates.transl.and.all.grants.R" queries PubMed and downloads associated BSSR-only publication data.5. "Step3.summary.stats.R" performs summary statistics6. "Step4.time.to.first.publication.R" performs time to first publication analysis.7. "Step5.time.to.citation.analysis.R" performs time to first citation and time to overall citation analyses.8. "Step6.combine.NIH.iCite.data.R" combines NIH iCite citation data.9. "Step7.iCite.data.analysis.R" performs citation analysis on combined iCite data.10. "Step8.MeSH.descriptors.R" queries PubMed and pulls down all MeSH descriptors for all publications11. "Step9.CTSA.publications.R" compares the percent of translational publications among bBSSR, BSSR-only, and CTSA publications.