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Complete Simulation and Analysis Data for Coupled Alya-HemeLB Model

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DataCite Commons2025-07-30 更新2026-05-07 收录
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https://rdr.ucl.ac.uk/articles/dataset/Complete_Simulation_and_Analysis_Data_for_Coupled_Alya-HemeLB_Model/27757932
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This dataset provides complete simulation and analysis data for the coupled Alya-HemeLB model described in the paper titled "A Multi-Component, Multi-Physics Computational Model for Solving Coupled Cardiac Electromechanics and Vascular Haemodynamics" by Sharp C. Y. Lo, Alberto Zingaro, Jon W. S. McCullough, Xiao Xue, Pablo Gonzalez-Martin, Balint Joo, Mariano Vazquez, and Peter V. Coveney (2025), where the corresponding author is Prof. Peter V. Coveney (p.v.coveney@ucl.ac.uk).The compressed folders for the simulation tests 0, 1, 2, and 3 consist of the following items:A summary of the different simulation cases (<b>exp.txt</b>)Alya simulation cases (<b>exp</b><b>X</b>), where "X" is the experiment number within each testOutputs of the analysed Alya simulation in the EnSight data format (<b>expX/</b><b>ensi</b>)HemeLB simulation cases (<b>hemelb-YYYY/expX</b>), where "tube" refers to the cylinder and "aorta" refers to the thoracic aorta. The simulation outputs can be found inside the folder "<b>Extracted</b>"A Python script for analysing the simulation results (<b>plotPQ.py</b>)Plots resulting from the analysis (PNG and PDF files)Job scripts used to run the simulations on the ARCHER2 supercomputer (<b>exp</b><b>X/job_alya.archer</b> for Alya and <b>hemelb-YYYY/job_hemelb.archer</b> for HemeLB)Intermediate files used to exchange data during coupling (<b>pressure.txt</b> and <b>velocity.txt</b>)A folder containing initial values of the exchanged data (<b>tmp</b>)The compressed folder for the convergence test contains similar contents but with a few differences, including the following:Standalone Alya simulation cases (<b>single_expX</b>)Alya simulation cases coupled with HemeLB (<b>coupled_expX)</b>HemeLB simulation cases coupled with Alya (<b>hemelb-tube/coupled_expX</b>)A Python script for assessing the convergence of the coupled model (<b>gridRefinement</b><b>.py</b>)Analysis results for the inlet and the plane Z of the cylinder (<b>results_inlet </b>and<b> results_planeZ</b>, respectively)The compressed folder for the performance test contains similar contents but with a few differences, including the following:Simulation cases of Alya and HemeLB using various numbers of computer nodes (<b>AaHhh</b> and <b>hemelb-aorta/AaHhh</b>, respectively), where "<b>a</b>" indicates the number of nodes used by Alya and "<b>hh</b>" indicates those used by HemeLBA Python script for assessing the computational performance of the coupled model (<b>measureTime</b><b>.py</b>)Analysis results (<b>measureTime_Aa.csv, </b><b>measureTime_Aa.png, </b><b>measureTime_Aa.pdf</b>)
提供机构:
University College London
创建时间:
2025-06-26
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