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KBase Narrative - Viral Analysis End-to-End

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DataCite Commons2022-05-25 更新2025-04-09 收录
下载链接:
https://www.osti.gov/servlets/purl/1868934/
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资源简介:
This pipeline processes a single metagenomic dataset (downloaded from NCBI SRA) from the Global Ocean Viromes dataset, identifies the viral sequences using VirSorter, and subsequently classifies them with vConTACT2. Along the way there are several intermediary steps to convert files from one KBase object to another - and though some of these can be skipped for this particular dataset - we're explicitly doing them here as to be more easily generalized to other datasets.
提供机构:
U.S. Department of Energy Systems Biology Knowledgebase
创建时间:
2022-05-21
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