Supplementary data for Alternative polyadenylation dynamics during the rice blast immune response
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https://zenodo.org/doi/10.5281/zenodo.19879149
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This dataset includes supplementary tables supporting the findings of this study on APA regulation in rice blast response.
Supplementary Table S1 List of the 157 continuously shortened genes and their alternative poly(A) site coordinates during the M. oryzae infection time course.
Supplementary Table S2 List of the 71 continuously lengthened genes and their alternative poly(A) site coordinates during the M. oryzae infection time course.
Supplementary Table S3 Alignment statistics of tags aligned to the reference genome
Supplementary Table S4 Summary of sequencing data for each sample
Supplementary Table S5 Known miRNAs across all samples
Supplementary Table S6 Unknown miRNAs across all samples
Supplementary Table S7 Predicted miRNAs across all samples
Supplementary Table S8 Predicted siRNAs across all samples
Supplementary Table S9 Intersection target genes of miRNAs predicted by TargetFinder and psRobot.
Supplementary Table S10 miRNAs that bind to APA genes as predicted by psRNATarget.
Supplementary Table S11 Sequences of primers used for synthesizing gRNA spacers and genotyping CRISPR-edited mutants.
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Zenodo
创建时间：
2026-04-29
