File S1 - Proteomic Profiling Identifies Distinct Protein Patterns in Acute Myelogenous Leukemia CD34+CD38- Stem-Like Cells

Contains all supplemental information for this manuscript in one location. Supplemental materials contains a comparison of RPPA and mRNA-GEP data. Table S1 contains the demographic and subset availability data for all cases. Table S2 lists the antibodies used in this study and details on primary and secondary antibody dilutions. Table S3 is a “Rosetta Stone” for the HUGO, Mimi and manufacturers antibody names . Table S4 lists the number of comparisons available between each subset. Table S5 lists proteins that were not different between LSC and bulk cells by protein function. Table S6 contains legends for the Cytoscape ™ figures. Figure S1 presents flow data showing the purity of the samples after sorting. Figure S2 is an expansion of regular Figure 2. It shows two way hierarchical clustering between C) CD34+ vs. Bulk cells, D) CD34+ vs. CD34- cells and E) Stem Cells and CD34+ cells. Figure S3 shows Network based clustering by protein functional category. Figure S4: Subnetworks for highly interconnected proteins for different cellular functions.
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