RepeatMasker output tables of repetitive sequences for Neurospora species

RepeatMasker output tables (.out and .tbl) of repetitive sequences from high-quality genome assemblies of Neurospora strains, based on PacBio RSII long-read sequencing data, and from reference strains (2508, 2509, 2489). Strains are listed using the strain number from the Fungal Genetics Stock Center (www.fgsc.net) or from the D Jacobson's personal collection (W1426, W1434).

Strain list:

FGSC # | Species
-------+----------------------

2508 | Neurospora tetrasperma L6
2509 | Neurospora tetrasperma L6
10752 | Neurospora tetrasperma L9
9045 | Neurospora tetrasperma L7
9046 | Neurospora tetrasperma L7
2503 | Neurospora tetrasperma L8
2504 | Neurospora tetrasperma L8
8817 | Neurospora hispaniola
W1426 | Neurospora sitophila
W1434 | Neurospora sitophila
5940 | Neurospora sitophila
5941 | Neurospora sitophila
2489 | Neurospora crassa
8761 | Neurospora intermedia
8767 | Neurospora intermedia
8807 | Neurospora intermedia
10397 | Neurospora metzenbergii
8579 | Neurospora discreta

Reference:
Jacobson, D. J., et al. New findings of
Neurospora in Europe and comparisons of diversity in temperate climates
on continental scales. Mycologia 98, 550–559 (2006).

For further information on the strains and the genome assemblies, please see:
Nguyen et al., (2021) "Transposons and genome dynamics in the fungal genus Neurospora: insights from nearly gapless genome assemblies ", in preparation.