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PhyloPythiaS+ 1.4 taxonomic binning of the CAMI 2 Mouse Gut Toy data set, gold standard pooled assembly

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Zenodo2020-01-28 更新2026-04-07 收录
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Taxonomic binning of the gold standard pooled assembly<br> <strong>Software: </strong>PhyloPythiaS+<br> <strong>SoftwareVersion: </strong>1.4<br> <strong>DataURL: </strong> https://data.cami-challenge.org/participate<br> <strong>SoftwareURL:</strong> https://github.com/algbioi/ppsp<br> <strong>DockerImage:</strong> cami/ppsp:1.4<br> <strong>IsBiobox:</strong> False<br> <strong>ReferenceDatabase:</strong> RefSeq 93, SILVA 132<br> <strong>Taxonomy:</strong> NCBI 2018-02-26<br> <strong>ShortReadsUsed:</strong> False<br> <strong>LongReadsUsed:</strong> False<br> <strong>CommandUsed:</strong> run_ppsp.py --pipelineDir ppsp_pipepline --inputFastaFile anonymous_gsa_pooled.fasta --databaseFile ncbi_taxonomy --refSeq refseq93 --s16Database SILVA_132 --mgDatabase reference_NCBI201502/mg5

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2020-01-28
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