bootstrap trees (maximum likelihood and neighbor joining) for target protein sequences
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The target protein alignments (MHC, TLR, RLR, KoRV) were used to build both maximum likelihood and neighbor joining trees using MEGA 5.2.2. The alignments and PROTEST 3.2 were used to determine the most appropriate substitution model to use while building the tree. For more detailed methods, please refer to the associated publication. Each tree is presented here in Newick format. The trees were run with 1,000 replicates and the branch lengths represent the bootstrap values. The accession numbers for the sequences used in these trees can be found in "Online Resource 1" of the associated publication.
创建时间：
2015-03-20
