脱落酸信号网络数据集,植物信号网络内各节点相互作用的布尔规则集
收藏帕依提提2024-03-04 收录
下载链接:
https://www.payititi.com/opendatasets/show-25924.html
下载链接
链接失效反馈官方服务:
资源简介:
其目的是确定描述该植物信号网络内各节点相互作用的布尔规则集。该数据集包括使用异步更新方案对真实规则进行的300次独立的布尔伪动力学模拟。这300次模拟中的每一次都从一个随机生成的初始条件开始,以确保对系统的所有稳定状态进行采样。这个数据集共有43个节点,其中5个节点是常数。 数据集中包括了300次独立的模拟结果。每个模拟由一个0和1的矩阵组成,有21行和43列。第一行是随机生成的特定模拟的初始条件,接下来的20行是布尔伪动力学模拟的输出。43列中的每一列代表一个特定节点的瞬态响应。节点名称在数据文件的顶部标识。一行星号被用来把模拟与另一个模拟分开。下面是一组数据的例子。 *************************** 1011101110101101101101001010001011000011001 1100001110111101101101111111011001011101011 1100011110111110101101100011010001110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 1100001110111110101101100011000011110101010 Attribute Information: Each node can have a value of 0 or 1. 38 of the 43 nodes are allowed to vary, with 5 nodes held constant throughout the simulation. Relevant Papers: Li S, Assman SM, Albert R (2006) Predicting essential components of signal transduction networks: a dynamic model of guard cell abscisic acid signaling. Plos Biology 4: p. 1732-1748 Soni, A.S., Jenkins, J.W., and Sundaram, S.S.: ”Determination of critical network interactions: An augmented Boolean pseudo-dynamics approach”, IET Systems Biology, vol. 2, p. 55-63 (2008). Citation Request: Please refer to the Machine Learning Repository's citation policy Jerry W. Jenkins, Ph.D. Systems Biology and Bioinformations Group CFD Research Corporation 215 Wynn Drive Huntsville, AL 35805 email: jwj '@' cfdrc.com Abhishek Soni, Ph.D. Systems Biology and Bioinformations Group CFD Research Corporation 215 Wynn Drive Huntsville, AL 35805 email: axs '@' cfdrc.com
提供机构:
帕依提提



