Additional file 3 of To kill or to be killed: pangenome analysis of Escherichia coli strains reveals a tailocin specific for pandemic ST131

Name: Additional file 3 of To kill or to be killed: pangenome analysis of Escherichia coli strains reveals a tailocin specific for pandemic ST131
Creator: Tantoso, Erwin; Eisenhaber, Frank; Eisenhaber, Birgit; Kirsch, Miles; Shitov, Vladimir; Zhao, Zhiya
Published: 2022-06-17 00:00:00
License: 暂无描述

Figshare2022-06-17 更新2026-04-08 收录

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https://springernature.figshare.com/articles/dataset/Additional_file_3_of_To_kill_or_to_be_killed_pangenome_analysis_of_Escherichia_coli_strains_reveals_a_tailocin_specific_for_pandemic_ST131/20087972

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Additional file 3. The Additional file 3 is a compressed file library (zip package) containing 11 files. File 1 genome list with serotypes, sequence types, phylogroups, etc. File 2A pangenome matrix determined with CD-HIT. File 2B softcore genome GF list determined with CD-HIT. File 3A pangenome matrix determined with ProteinOrtho. File 3B softcore genome GF list determined with ProteinOrtho. File 4 the GFs of the six distinctive clusters. File 5 summary of the strains’ virulence and antibiotics resistance. File 6 antibiogram data. File 7 virulence factor PAM. File 8 coincident pairwise association results from CoinFinder. README.

提供机构：

Tantoso, Erwin; Eisenhaber, Frank; Eisenhaber, Birgit; Kirsch, Miles; Shitov, Vladimir; Zhao, Zhiya

创建时间：

2022-06-17