The fecal microbiome was studied in a group of IBD suffers and compared to a control group's fecal microbiome. Analysis of the IBD microbiome

Ten IBD and 10 healthy individual's fecal microbiomes were determined by NGS sequencing, to identify features that are unique to each group. This was done using shot-gun metagenomics of DNA extracted from fecal samples and run on a HiSeq 2500. Sample affiliation: Sample Description Library Name Dilution Name Tag Barcode Lane Read HEALTHY 1 LIB6632 LDI6150 1: Index 23 (GAGTGG) L001 R1 HEALTHY 1 LIB6632 LDI6150 1: Index 23 (GAGTGG) L001 R2 HEALTHY 1 LIB6632 LDI6150 1: Index 23 (GAGTGG) L002 R1 HEALTHY 1 LIB6632 LDI6150 1: Index 23 (GAGTGG) L002 R2 HEALTHY 2 LIB6633 LDI6151 1: Index 25 (ACTGAT) L001 R1 HEALTHY 2 LIB6633 LDI6151 1: Index 25 (ACTGAT) L001 R2 HEALTHY 2 LIB6633 LDI6151 1: Index 25 (ACTGAT) L002 R1 HEALTHY 2 LIB6633 LDI6151 1: Index 25 (ACTGAT) L002 R2 HEALTHY 3 LIB6634 LDI6152 1: Index 2 (CGATGT) L001 R1 HEALTHY 3 LIB6634 LDI6152 1: Index 2 (CGATGT) L001 R2 HEALTHY 3 LIB6634 LDI6152 1: Index 2 (CGATGT) L002 R1 HEALTHY 3 LIB6634 LDI6152 1: Index 2 (CGATGT) L002 R2 HEALTHY 4 LIB6635 LDI6153 1: Index 3 (TTAGGC) L001 R1 HEALTHY 4 LIB6635 LDI6153 1: Index 3 (TTAGGC) L001 R2 HEALTHY 4 LIB6635 LDI6153 1: Index 3 (TTAGGC) L002 R1 HEALTHY 4 LIB6635 LDI6153 1: Index 3 (TTAGGC) L002 R2 HEALTHY 5 LIB6636 LDI6154 1: Index 4 (TGACCA) L001 R1 HEALTHY 5 LIB6636 LDI6154 1: Index 4 (TGACCA) L001 R2 HEALTHY 5 LIB6636 LDI6154 1: Index 4 (TGACCA) L002 R1 HEALTHY 5 LIB6636 LDI6154 1: Index 4 (TGACCA) L002 R2 HEALTHY 6 LIB6637 LDI6155 1: Index 7 (CAGATC) L001 R1 HEALTHY 6 LIB6637 LDI6155 1: Index 7 (CAGATC) L001 R2 HEALTHY 6 LIB6637 LDI6155 1: Index 7 (CAGATC) L002 R1 HEALTHY 6 LIB6637 LDI6155 1: Index 7 (CAGATC) L002 R2 HEALTHY 7 LIB6638 LDI6156 1: Index 9 (GATCAG) L001 R1 HEALTHY 7 LIB6638 LDI6156 1: Index 9 (GATCAG) L001 R2 HEALTHY 7 LIB6638 LDI6156 1: Index 9 (GATCAG) L002 R1 HEALTHY 7 LIB6638 LDI6156 1: Index 9 (GATCAG) L002 R2 HEALTHY 8 LIB6639 LDI6157 1: Index 15 (ATGTCA) L001 R1 HEALTHY 8 LIB6639 LDI6157 1: Index 15 (ATGTCA) L001 R2 HEALTHY 8 LIB6639 LDI6157 1: Index 15 (ATGTCA) L002 R1 HEALTHY 8 LIB6639 LDI6157 1: Index 15 (ATGTCA) L002 R2 HEALTHY 9 LIB6640 LDI6158 1: Index 16 (CCGTCC) L001 R1 HEALTHY 9 LIB6640 LDI6158 1: Index 16 (CCGTCC) L001 R2 HEALTHY 9 LIB6640 LDI6158 1: Index 16 (CCGTCC) L002 R1 HEALTHY 9 LIB6640 LDI6158 1: Index 16 (CCGTCC) L002 R2 HEALTHY10 LIB6641 LDI6159 1: Index 18 (GTCCGC) L001 R1 HEALTHY10 LIB6641 LDI6159 1: Index 18 (GTCCGC) L001 R2 HEALTHY10 LIB6641 LDI6159 1: Index 18 (GTCCGC) L002 R1 HEALTHY10 LIB6641 LDI6159 1: Index 18 (GTCCGC) L002 R2 IBD 1 LIB6642 LDI6160 1: Index 20 (GTGGCC) L001 R1 IBD 1 LIB6642 LDI6160 1: Index 20 (GTGGCC) L001 R2 IBD 1 LIB6642 LDI6160 1: Index 20 (GTGGCC) L002 R1 IBD 1 LIB6642 LDI6160 1: Index 20 (GTGGCC) L002 R2 IBD 2 LIB6643 LDI6161 1: Index 21 (GTTTCG) L001 R1 IBD 2 LIB6643 LDI6161 1: Index 21 (GTTTCG) L001 R2 IBD 2 LIB6643 LDI6161 1: Index 21 (GTTTCG) L002 R1 IBD 2 LIB6643 LDI6161 1: Index 21 (GTTTCG) L002 R2 IBD3 LIB6644 LDI6162 1: Index 22 (CGTACG) L001 R1 IBD3 LIB6644 LDI6162 1: Index 22 (CGTACG) L001 R2 IBD3 LIB6644 LDI6162 1: Index 22 (CGTACG) L002 R1 IBD3 LIB6644 LDI6162 1: Index 22 (CGTACG) L002 R2 IBD4 LIB6645 LDI6163 1: Index 27 (ATTCCT) L001 R1 IBD4 LIB6645 LDI6163 1: Index 27 (ATTCCT) L001 R2 IBD4 LIB6645 LDI6163 1: Index 27 (ATTCCT) L002 R1 IBD4 LIB6645 LDI6163 1: Index 27 (ATTCCT) L002 R2 IBD5 LIB6646 LDI6164 1: Index 1 (ATCACG) L001 R1 IBD5 LIB6646 LDI6164 1: Index 1 (ATCACG) L001 R2 IBD5 LIB6646 LDI6164 1: Index 1 (ATCACG) L002 R1 IBD5 LIB6646 LDI6164 1: Index 1 (ATCACG) L002 R2 IBD6 LIB6647 LDI6165 1: Index 5 (ACAGTG) L001 R1 IBD6 LIB6647 LDI6165 1: Index 5 (ACAGTG) L001 R2 IBD6 LIB6647 LDI6165 1: Index 5 (ACAGTG) L002 R1 IBD6 LIB6647 LDI6165 1: Index 5 (ACAGTG) L002 R2 IBD7 LIB6648 LDI6166 1: Index 6 (GCCAAT) L001 R1 IBD7 LIB6648 LDI6166 1: Index 6 (GCCAAT) L001 R2 IBD7 LIB6648 LDI6166 1: Index 6 (GCCAAT) L002 R1 IBD7 LIB6648 LDI6166 1: Index 6 (GCCAAT) L002 R2 IBD8 LIB6649 LDI6167 1: Index 8 (ACTTGA) L001 R1 IBD8 LIB6649 LDI6167 1: Index 8 (ACTTGA) L001 R2 IBD8 LIB6649 LDI6167 1: Index 8 (ACTTGA) L002 R1 IBD8 LIB6649 LDI6167 1: Index 8 (ACTTGA) L002 R2 IBD9 LIB6650 LDI6168 1: Index 10 (TAGCTT) L001 R1 IBD9 LIB6650 LDI6168 1: Index 10 (TAGCTT) L001 R2 IBD9 LIB6650 LDI6168 1: Index 10 (TAGCTT) L002 R1 IBD9 LIB6650 LDI6168 1: Index 10 (TAGCTT) L002 R2 IBD10 LIB6651 LDI6169 1: Index 11 (GGCTAC) L001 R1 IBD10 LIB6651 LDI6169 1: Index 11 (GGCTAC) L001 R2 IBD10 LIB6651 LDI6169 1: Index 11 (GGCTAC) L002 R1 IBD10 LIB6651 LDI6169 1: Index 11 (GGCTAC) L002 R2