Expression of 197 surface markers and 462 mRNAs in 15281 cells from blood and bone marrow from a young healthy donor

seurat v3 object

ASSAYS:
AB: Antibody expression data
RNA: mRNA expression data
BOTH: Antibody and mRNA expression matrices concatenated

DIMENSIONALITY REDUCTION
Projected: Data was projected on the reference dataset MOFAUMAP coordinates.

METADATA
Batch: Sample1 (Bone marrow) or Sample2 (Blood)

ct: Projected cell type (cell type labels from the reference dataset are used).
Idents(object) uses an unsupervised clustering performed on this dataset.

For the reference dataset, see https://doi.org/10.6084/m9.figshare.13397651.v2

Changelog
v2: Compared to the previous version of the file, projected UMAP coordinates and projected cell type labels were added.
v3: Objects were slimmed to correspond to the information described in our study. Data now only contains relevant dimensions reductions and metadata columns; unused RNA and antibody targets were excluded from the objects.
v4: Added Batch information back in which was dropped from v2 to v3