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Methods comparison for ribosome profiling
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2015-07-01
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Calculations related to figures Figs 5E and S9.
Determination of the peak area and error bar calculation. From the UV absorption profile of each gradient, areas under each peak corresponding to ribosomal subunits or 80S ribosomes were measured. To
NIAID Data Ecosystem60
Genome-wide translational changes induced by the prion [PSI+]
Prions are infectious proteins that can adopt a structural conformation different from that of the normal protein. This change of conformation is then propagated among other molecules of the same prot
NIAID Data Ecosystem40
Study of ribosome dynamics after eIF5A depletion in budding yeast
eIF5A is an essential translation elongation factor present in all eukaryotes, and the only known protein to follow a post-translational modification called hypusination. Here, we performed a wide ana
Alliance of Genome Resources30
Single Nucleotide Resolution Analysis of Nucleotide Excision Repair of Ribosomal DNA in Humans and Mice
In the present work we have applied analytical methods to map repair events in rDNA using data generated by the newly developed XR-seq genome-wide single nucleotide repair technology. We find that in
NIAID Data Ecosystem60
Comparison of fall risk metrics between the Markov chain and brute force methods.
The % Match column gives the percentage of Markov chain values that were within one standard deviation of the corresponding brute force values. The median error column give the median of the absolute
NIAID Data Ecosystem30
