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Metagenome Assembled Genomes from a Permafrost Thaw Experiment

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Zenodo2025-09-01 更新2026-05-26 收录
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Controlled thaw experiments were performed on permafrost cores taken from three permafrost sites in interior and northern Alaska . These include a site above the Cold Regions Research and Engineering (CRREL) Permafrost Tunnel (AT), the CRREL Farmers Loop Experimental Station (FL), and the Barrow Experimental Observatory (BEO). Each site had two cores, from which we subsampled four replicates. Frozen soil cores were gradually thawed at 2C for 96 days. bin_coverage_coverm_metaspades.tsv.gz: bin coverage across metagenomic samples calculated with coverm bins.tar.gz: bin fasta files for low contamination bins cog_counts.rda.gz: eggnogmapper cog counts per bin (R data file) dbcan_counts_warming_ms_arch.tsv.gz: dbcan output on bins (archaea) dbcan_counts_warming_ms.tsv.gz: dbcan output on bins (bacteria) gtdbtk.ar53.summary.tsv.gz: GTDB-tk bin classification gtdbtk.bac120.summary.tsv.gz: GTDB-tk bin classification quality_report.tsv.gz: CheckM2 bin quality warming_gRodon_predictions_ms.rda.gz: gRodon output bins (R data file) warming_gRodon_predictions_ms_scaffolds.rda.gz: gRodon output metagenomic scaffolds (R data file)

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Zenodo
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2025-09-01
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