List of sites found to be evolving under directional selection in the entire tree, using a FUBAR-like implementation of the DEPS method.

The BA.5 tree was rooted on the genome reference sequence for this analysis. Coordinate (SARS-CoV-2): the starting coordinate of the codon in the NCBI reference SARS-CoV-2 genome Gene/ORF: which gene or ORF does this site belong to. Codon (in gene/ORF): the location of the codon in the corresponding Gene/ORF. Target amino-acid: which amino-acids have statistical support (Bayes Factor ≥ 100) for accelerated evolution towards them.
(CSV)