Additional file 6 of Amyloid fibril proteomics of AD brains reveals modifiers of aggregation and toxicity

Additional file 6: Table S4. List of proteins identified in label-free MS analysis of amyloid fibrils isolated from mouse and human cortices following multiprotease digestion. Proteins identified in purified fibrils following their additional multiprotease digestion (N = 8 - 10). Each sheet represents an individual mouse line or human patient data sets, and each row has individual p values using Student’s t test, and adjusted p values with BH correction. Experiment = specific data set, Uniprot accession= Uniprot identifier for each protein, ratio= log2 average NSAF values (purified fibrils/homogenate), t test p value = t test p value, Rank= rank ordered proteins based on p value (if p values are identical, higher ratio was listed first), Adjusted p value is calculated using BH correction, description= protein description.