Supplementary data for the paper "Benchmarking bacterial genome-wide association study (GWAS) methods using simulated genomes and phenotypes": https://www.biorxiv.org/content/10.1101/795492v1
Present-day hunter-gatherers live in multilevel social groups essential to sustain a population structure characterized by limited levels of within-band relatedness and inbreeding. When these wider so
PacBio sequencing was used to sequence and assembly genomes from clinical M. tuberculosis isolates. The PacBio genome assemblies were then used to benchmark variant calling performance of short-read I