Splice altering variant predictions in four archaic hominin genomes

This file contains high-quality autosomal SNVs that occur among four
high-coverage archaic genomes aligned to the hg19/GRCh37 reference genome.
Each entry corresponds to a single variant with a distinct GENCODE, Human
Release 24, annotation per genomic position. Data per variant includes the
genomic position, reference/alternate alleles, archaic genotypes, gene
annotation, and additional data relevant to the analysis of splicing
variants: SpliceAI annotations gene constraint measured using data from
gnomAD variant conservation measured using phyloP allele origin allele
frequencies in modern humans from the Thousand Genomes Project and gnomAD
introgression metadata sQTL data from GTEx