Data from: Bacterial communities within Phengaris (Maculinea) alcon caterpillars are shifted following transition from solitary living to social parasitism of Myrmica ant colonies

16S amplicon sequencing and qPCR dataThis archive contains 1) raw Illumina MiSeq reads (300bp, PE, Reagent Kit v3) for all bacterial 16S V3/V4 amplicons used in our study, 2) metadata for each sample/individual, formatted as a QIIME 1.9 mapping file, 3) preprocessed data and .biom tables used to generate our results using phyloseq 1.22.3, and 4) raw data from qPCR analyses used to generate our results. We used two databases, greengenes 13_8 and SILVA NR Small Subunit v128 to assign taxonomy in our study; the filenames of preprocessed data include the database used to generate each file.Szenteczki_et_al_P_alcon_16S_sequencing_and_qPCR_data.zip