BIOSNAP_DDI_and_genes_data

DataCite Commons2025-06-01 更新2024-08-18 收录

下载链接：

https://figshare.com/articles/dataset/BIOSNAP_DDI_and_genes_data/23600565/1

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资源简介：

# NamE Datasets Jeffrey Seathrún Sardina ## Information and Use Datasets for the paper "NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings". Datasets are given with all variant forms, and with the original train-test-valid spits used in the paper. Train, test, and valid files are marked as such in the file prefix (e.g. "*-train.csv.gz"). Datasets beginning in "triples-" contain triples in a comma-separated format; i.e. ``` subject,predicate,object subject,predicate,object subject,predicate,object ``` Datasets beginning in "quads-" contain quads in a comma-separated format; i.e. ``` subject,predicate,object,namedGraph subject,predicate,object,namedGraph subject,predicate,object,namedGraph ``` All datasets are gzipped; on most systems (Linux / MAC) you can uncompress these with "gunzip (file)" if needed. ## Citation If you use these datasets or NamE in your work, please cite "NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings" ``` BIBTEX citation pending ``` Included below are citations to the data sources from which these datasets were created. Note that the triples form of FB15K-237, as it appears in this repository, is unmodified from its original version. **BIOSNAP dataset citation:** ``` @misc{biosnap, author = {Marinka Zitnik, Rok Sosi\v{c}, Sagar Maheshwari, and Jure Leskovec}, title = {{BioSNAP Datasets}: {Stanford} Biomedical Network Dataset Collection}, howpublished = {\url{http://snap.stanford.edu/biodata}}, month = aug, year = 2018 } ```

# NamE数据集 Jeffrey Seathrún Sardina ## 数据集信息与使用规范 本数据集对应论文《NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings》。数据集包含所有变体形式，并附带论文中使用的原始训练集（train set）、测试集（test set）与验证集（valid set）划分方案。训练、测试与验证文件会在文件名前缀中进行标注（例如"*-train.csv.gz"）。 文件名以"triples-"开头的数据集采用逗号分隔格式存储三元组（triple），格式如下： subject,predicate,object subject,predicate,object subject,predicate,object 其中`subject`为头实体，`predicate`为关系，`object`为尾实体。 文件名以"quads-"开头的数据集采用逗号分隔格式存储四元组（quad），格式如下： subject,predicate,object,namedGraph subject,predicate,object,namedGraph subject,predicate,object,namedGraph 其中`namedGraph`为命名图。 所有数据集均采用gzip压缩；在大多数Linux/macOS系统中，若有需要可通过`gunzip <文件名>`命令进行解压。 ## 引用说明 若您在研究工作中使用本数据集或NamE方法，请引用论文《NamE: Named Graph Embeddings for Context Modelling and Expert Knowledge Integration in Knowledge Graph Embeddings》。当前BibTeX引用格式待补充。 以下列出了本数据集所依托的原始数据源的引用信息。需注意，本仓库中FB15K-237的三元组形式未做任何修改，与原始版本完全一致。 **BIOSNAP数据集引用：** @misc{biosnap, author = {Marinka Zitnik, Rok Sosiv{c}, Sagar Maheshwari, and Jure Leskovec}, title = {{BioSNAP Datasets}: {Stanford} Biomedical Network Dataset Collection}, howpublished = {url{http://snap.stanford.edu/biodata}}, month = aug, year = 2018 }

提供机构：

figshare

创建时间：

2023-06-29

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