Table S2, MLST type, dDDH and ANI values with reference genomes
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Table S2, MLST type, and dDDH and ANI values with reference genomesAverage nucleotide identity (ANI) and dDDH were calculated using the pyani pipeline [12] and the genome-to-genome distance calculator (GGDC, formula 2), respectively. Additionally, Identification of acquired AMR genes, plasmid replicon types, and multilocus sequence types was conducted using the Staramr pipeline (v0.11.0) [12], incorporating ResFinder (database version 06.08.2024), PlasmidFinder (database version 08.08.2024), and MLST (v2.23.0).
创建时间：
2025-04-20
