Table S2, MLST type, dDDH and ANI values with reference genomes

Table S2, MLST type, and dDDH and ANI values with reference genomesAverage nucleotide identity (ANI) and dDDH were calculated using the pyani pipeline [12] and the genome-to-genome distance calculator (GGDC, formula 2), respectively. Additionally, Identification of acquired AMR genes, plasmid replicon types, and multilocus sequence types was conducted using the Staramr pipeline (v0.11.0) [12], incorporating ResFinder (database version 06.08.2024), PlasmidFinder (database version 08.08.2024), and MLST (v2.23.0).