SQUID manuscript workflow with outputs

This repository reproduces the analysis performed in for our method SQUID (Surrogate Quantitative Interpretability for Deepnets; Seitz, McCandlish, Kinney and Koo). It contains tools to apply SQUID on several previously-published genomic models, and compare its results to existing attribution methods. The scripts contained in this release are an exact replica of those found in the initial release of our GitHub repository (https://github.com/evanseitz/squid-manuscript), with the addition that all intermediate and final outputs are provided here.